Package: hdcuremodels 0.0.2

hdcuremodels: Penalized Mixture Cure Models for High-Dimensional Data

Provides functions for fitting various penalized parametric and semi-parametric mixture cure models with different penalty functions, testing for a significant cure fraction, and testing for sufficient follow-up as described in Fu et al (2022)<doi:10.1002/sim.9513> and Archer et al (2024)<doi:10.1186/s13045-024-01553-6>. False discovery rate controlled variable selection is provided using model-X knock-offs.

Authors:Han Fu [aut], Kellie J. Archer [aut, cre]

hdcuremodels_0.0.2.tar.gz
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hdcuremodels.pdf |hdcuremodels.html
hdcuremodels/json (API)

# Install 'hdcuremodels' in R:
install.packages('hdcuremodels', repos = c('https://kelliejarcher.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/kelliejarcher/hdcuremodels/issues

Datasets:

On CRAN:

Conda:

4.54 score 5 scripts 132 downloads 10 exports 100 dependencies

Last updated 2 days agofrom:2e03b116b1. Checks:5 OK, 2 NOTE, 2 ERROR. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 31 2025
R-4.5-winNOTEMar 31 2025
R-4.5-macERRORMar 31 2025
R-4.5-linuxNOTEMar 31 2025
R-4.4-winOKMar 31 2025
R-4.4-macOKMar 31 2025
R-4.4-linuxOKMar 31 2025
R-4.3-winOKMar 31 2025
R-4.3-macERRORMar 31 2025

Exports:auc_mcmconcordance_mcmcure_estimatecureemcuregmifscv_cureemcv_curegmifsgenerate_cure_datanonzerocure_testsufficient_fu_test

Dependencies:abindassertthatbackportsbbmlebdsmatrixBHbootbroomcarcarDataclicodetoolscolorspacecorpcorcorrplotcowplotcpp11data.tableDerivdeSolvedoBydoParalleldplyrfansifarverfastGHQuadflexsurvflexsurvcureforeachFormulagenericsggplot2ggpubrggrepelggsciggsignifglmnetgluegridExtragtablegtoolsisobanditeratorsknockofflabelinglatticelifecyclelme4magrittrMASSMatrixMatrixModelsmgcvmicrobenchmarkminqamodelrmstatemuhazmunsellmvnfastmvtnormnlmenloptrnnetnumDerivpbkrtestpillarpkgconfigplyrpolynompurrrquadprogquantregR6rbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRdpackRdsdpreformulasrlangRSpectrarstatixrstpm2scalesshapeSparseMstatmodstringistringrsurvivaltibbletidyrtidyselectutf8vctrsviridisLitewithr

hdcuremodels-vignette

Rendered fromhdcuremodels.Rmdusingknitr::rmarkdownon Mar 31 2025.

Last update: 2025-03-21
Started: 2025-03-21